Eur. Phys. J. D 63, 359-367 (2011)
https://doi.org/10.1140/epjd/e2011-10679-1

Regular Article

Heavy ion induced damage to plasmid DNA: plateau region vs. spread out Bragg-peak

KVI University of Groningen, Zernikelaan 25, 9747AA Groningen, The Netherlands

^a e-mail: tschlat@kvi.nl

Received: 30 November 2010
Received in final form: 30 March 2011
Published online: 17 June 2011

Abstract

We have investigated the damage of synthetic plasmid pBR322 DNA in dilute aqueous solutions induced by fast carbon ions. The relative contribution of indirect damage and direct damage to the DNA itself is expected to vary with linear energy transfer along the ion track, with the direct damage contribution increasing towards the Bragg peak. Therefore, ¹²C ions at the spread-out Bragg peak (dose averaged LET_∞ = 189 ± 15 keV/μm) and in the plateau region of the Bragg curve (LET = 40 keV/μm) were employed and the radical scavenger concentration in the plasmid solution was varied to quantify the indirect effect. In order to minimize the influence of ¹²C break-up fragments, a relatively low initial energy of 90 MeV/nucleon was employed for the carbon ions. DNA damage has been quantified by subsequent electrophoresis on agarose gels. We find that strand breaks due to both indirect and direct effects are systematically higher in the plateau region as compared to the Bragg peak region with the difference being smallest at high scavenging capacities. In view of the fact that the relative biological effectiveness for many biological endpoints is maximum at the Bragg peak our findings imply that DNA damage at the Bragg peak is qualitatively most severe.